You are viewing an old version of this content. View the current version.
Compare with Current
View Version History
« Previous
Version 11
Next »
The example below explains how the GSRS Data on Amlodipine is represented in the structure of the IDMP Ontology.
Substance
<https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/ChemicalSubstance>
rdf:type owl:Class ;
rdfs:subClassOf <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/SingleSubstance> ;
rdfs:label "chemical substance" ;
skos:definition "single substance that can be described as a stoichiometric or non-stoichiometric single molecular entity and is not a protein, nucleic acid or polymer substance" .
<https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/SingleSubstance>
rdf:type owl:Class ;
rdfs:subClassOf <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/Substance> ;
rdfs:label “single substance" ;
skos:definition "substance that can be described by a single representation or set of descriptive elements“ .
<https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/Substance>
rdf:type owl:Class ;
rdfs:label “single substance" ;
skos:definition "substance that can be described by a single representation or set of descriptive elements“ .
<https://gsrs.ncats.nih.gov/api/v1/substances/1J444QC288>
rdf:type <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/ChemicalSubstance> ;
rdfs:label "AMLODIPINE" .

Substance Names
<https://gsrs.ncats.nih.gov/api/v1/substances/1J444QC288>
rdf:type <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/ChemicalSubstance> ;
rdfs:label "AMLODIPINE" ;
cmns-dsg:hasName <https://gsrs.ncats.nih.gov/api/v1/substances/1J444QC288/f7a0a700-a9e5-4be8-a615-7f4e271c8f00> .
<https://gsrs.ncats.nih.gov/api/v1/substances/1J444QC288/62fae2dd-eca3-4985-899b-79154991441a>
rdf:type <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/SubstanceName> ;
cmns-txt:hasTextValue "3-ETHYL 5-METHYL (+/-)-2-((2-AMINOETHOXY)METHYL)-4-(O-CHLOROPHENYL)-1,4-DIHYDRO-6-METHYL-3,5-PYRIDINEDICARBOXYLATE" ;
cmns-cls:isClassifiedBy <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/IUPACName> .
<https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/SubstanceName>
rdf:type owl:Class ;
rdfs:label "substance name" ;
skos:definition "name or company code associated with the substance" .
<https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/IUPACName>
rdf:type <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/SubstanceNameClassifier> ;
rdfs:label "IUOPAC name" .
<https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/SubstanceNameClassifier>
rdf:type owl:Class ;
rdfs:label "substance name classifier" .

Substance Identifiers
<https://gsrs.ncats.nih.gov/api/v1/substances/1J444QC288>
rdf:type <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/ChemicalSubstance> ;
rdfs:label "AMLODIPINE" ;
cmns-id:isIdentifiedBy <https://data.pistoiaalliance.org/EVMPD/SUB05467MIG> .
<https://data.pistoiaalliance.org/EVMPD/SUB05467MIG>
rdf:type <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/EudraVigilanceCode> ;
cmns-txt:hasTextValue "SUB05467MIG" ;
cmns-ra:isRegisteredIn <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/ExtendedEudraVigilanceMedicinalProductDictionary> ;
cmns-ra:hasRegistrationAuthority <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/EuropeanMedicinesAgencyRegistrationAuthority> .
<https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/EudraVigilanceCode>
rdfs:subClassOf owl:Class ;
rdfs:subClassOf <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/SubstanceCode> ;
rdfs:label "EudraVigilance code" ;
cmns-av:abbreviation "EV code" .
<https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/SubstanceCode>
rdf:type owl:Class ;
rdfs:subClassOf <https://www.omg.org/spec/Commons/RegistrationAuthorities/RegisteredIdentifier> ;
rdfs:label "substance code" .
<https://www.omg.org/spec/Commons/RegistrationAuthorities/RegisteredIdentifier>
rdf:type owl:Class ;
rdfs:label "registered identifier" .
<https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/ExtendedEudraVigilanceMedicinalProductDictionary>
rdf:type <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/Registry> ;
rdfs:label "eXtended EudraVigilance Medicinal Product Dictionary" ;
cmns-av:abbreviation "XEVMPD" .
<https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/Registry>
rdf:type owl:Class ;
rdfs:label "registry" .
<https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/EuropeanMedicinesAgencyRegistrationAuthority>
rdf:type <https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/RegistrationAuthority> ;
rdfs:label "European Medicines Agency Registration Authority" .
<https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/RegistrationAuthority>
rdf:type owl:Class ;
rdfs:label "registration authority" .

Substance Codes
clearly describe difference to "Substance Identifiers"
